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Details

Stereochemistry ABSOLUTE
Molecular Formula C14H15BrClNO6
Molecular Weight 408.629
Optical Activity UNSPECIFIED
Defined Stereocenters 5 / 5
E/Z Centers 0
Charge 0

SHOW SMILES / InChI
Structure of 5-BROMO-4-CHLOROINDOL-3-YL .BETA.-D-GALACTOPYRANOSIDE

SMILES

OC[C@H]1O[C@@H](OC2=CNC3=CC=C(Br)C(Cl)=C23)[C@H](O)[C@@H](O)[C@H]1O

InChI

InChIKey=OPIFSICVWOWJMJ-AEOCFKNESA-N
InChI=1S/C14H15BrClNO6/c15-5-1-2-6-9(10(5)16)7(3-17-6)22-14-13(21)12(20)11(19)8(4-18)23-14/h1-3,8,11-14,17-21H,4H2/t8-,11+,12+,13-,14-/m1/s1

HIDE SMILES / InChI

Molecular Formula C14H15BrClNO6
Molecular Weight 408.629
Charge 0
Count
Stereochemistry ABSOLUTE
Additional Stereochemistry No
Defined Stereocenters 5 / 5
E/Z Centers 0
Optical Activity UNSPECIFIED

5-bromo-4-chloro-3-indolyl β-D-galactopyranoside (X-GAL) is a chromogenic substrate for β-Galactosidase that forms an intense blue precipitate. X-gal staining is a rapid and convenient histochemical technique used to detect reporter gene expression. It can be used in molecular biology to detect the gal gene product, and also in microbiology where it is used to detect microorganisms which have β-Galactosidase activity (usually coliforms).

Originator

Curator's Comment: reference retrieved from http://www.druglead.com/cds/x-gal.html

Approval Year

Targets

Targets

Primary TargetPharmacologyConditionPotency
Target ID: Q8VNN2
Gene ID: NA
Gene Symbol: lacZ
Target Organism: Escherichia coli
Conditions

Conditions

ConditionModalityTargetsHighest PhaseProduct
PubMed

PubMed

TitleDatePubMed
A COMPARATIVE STUDY OF A SERIES OF NEW INDOLYL COMPOUNDS TO LOCALIZE BETA-GALACTOSIDASE IN TISSUES.
1963 Dec
SUBSTRATES FOR CYTOCHEMICAL DEMONSTRATION OF ENZYME ACTIVITY. I. SOME SUBSTITUTED 3-INDOLYL-BETA-D-GLYCOPYRANOSIDES.
1964 Jul
Detection of β-galactosidase activity: X-gal staining.
2012
Patents

Patents

Sample Use Guides

In Vivo Use Guide
Unknown
Route of Administration: Unknown
Protocol Prepare a 20 mg/ml stock solution of 5-bromo-4-chloro-3-indolyl β-D-galactopyranoside (X-GAL) in N,Ndimethylformamide (DMF) or dimethylsulfoxide (DMSO). Procedures Blue/White Colony Screening a) X-Gal included in agar: Add 5 ml of X-Gal stock solution and 5 ml of 0.1 M isopropyl-b-D-thiogalactoside (IPTG, BIO-37082) for each 1L of autoclaved media agar (e.g. LB agar) containing appropriate antibiotics just before pouring. The media should be below 55 °C. Plate cells on cooled agar and incubate overnight at 37 °C. b) X-Gal applied to top of agar: To a premade LB agar plate (e.g. prepared using LB agar), add 40 µl of X-Gal stock solution (at room temperature) and 4 µl of a 200 mg/ml solution of IPTG. Spread solution over the entire surface of the plate. Incubate at 37 °C until the fluid is no longer visible. This may take several hours. Plate cells and incubate overnight at 37 °C.
Substance Class Chemical
Created
by admin
on Fri Dec 15 18:00:29 UTC 2023
Edited
by admin
on Fri Dec 15 18:00:29 UTC 2023
Record UNII
V595OG374W
Record Status Validated (UNII)
Record Version
  • Download
Name Type Language
5-BROMO-4-CHLOROINDOL-3-YL .BETA.-D-GALACTOPYRANOSIDE
Common Name English
.BETA.-D-GALACTOPYRANOSIDE, 5-BROMO-4-CHLORO-1H-INDOL-3-YL
Common Name English
INDOLE, 5-BROMO-4-CHLORO-3-(.BETA.-D-GALACTOPYRANOSYLOXY)-
Common Name English
5-BROMO-4-CHLORO-3-C-INDOLYL-.BETA.-D-GALACTOPYRANOSE
Systematic Name English
X-GAL [MI]
Common Name English
5-BROMO-4-CHLORO-3-INDOLYL BETA-GALACTOSIDE
Common Name English
5-BROMO-4-CHLORO-1H-INDOL-3-YL .BETA.-D-GALACTOPYRANOSIDE
Common Name English
GALACTOPYRANOSIDE, 5-BROMO-4-CHLOROINDOL-3-YL, .BETA.-D-
Common Name English
5-BROMO-4-CHLORO-3-INDOYL-.BETA.-GALACTOPYRANOSIDE
Common Name English
X-GAL
MI  
Common Name English
5-BROMO-4-CHLOROINDOL-3-YL, .BETA.-D-GALACTOPYRANOSIDE
Common Name English
Code System Code Type Description
MERCK INDEX
m11542
Created by admin on Fri Dec 15 18:00:29 UTC 2023 , Edited by admin on Fri Dec 15 18:00:29 UTC 2023
PRIMARY Merck Index
CAS
7240-90-6
Created by admin on Fri Dec 15 18:00:29 UTC 2023 , Edited by admin on Fri Dec 15 18:00:29 UTC 2023
PRIMARY
MESH
C044888
Created by admin on Fri Dec 15 18:00:29 UTC 2023 , Edited by admin on Fri Dec 15 18:00:29 UTC 2023
PRIMARY
PUBCHEM
65181
Created by admin on Fri Dec 15 18:00:29 UTC 2023 , Edited by admin on Fri Dec 15 18:00:29 UTC 2023
PRIMARY
WIKIPEDIA
X-GAL
Created by admin on Fri Dec 15 18:00:29 UTC 2023 , Edited by admin on Fri Dec 15 18:00:29 UTC 2023
PRIMARY
CHEBI
75055
Created by admin on Fri Dec 15 18:00:29 UTC 2023 , Edited by admin on Fri Dec 15 18:00:29 UTC 2023
PRIMARY
FDA UNII
V595OG374W
Created by admin on Fri Dec 15 18:00:29 UTC 2023 , Edited by admin on Fri Dec 15 18:00:29 UTC 2023
PRIMARY
ECHA (EC/EINECS)
230-640-8
Created by admin on Fri Dec 15 18:00:29 UTC 2023 , Edited by admin on Fri Dec 15 18:00:29 UTC 2023
PRIMARY