U.S. Department of Health & Human Services Divider Arrow National Institutes of Health Divider Arrow NCATS

Details

Stereochemistry ABSOLUTE
Molecular Formula C22H23F3N4O4
Molecular Weight 464.4376
Optical Activity UNSPECIFIED
Defined Stereocenters 2 / 2
E/Z Centers 0
Charge 0

SHOW SMILES / InChI
Structure of CRENIGACESTAT

SMILES

C[C@H](NC(=O)CCC(F)(F)F)C(=O)N[C@H]1C2=C(C=CC=C2)C3=C(N=CC=C3)N(CCO)C1=O

InChI

InChIKey=YCBAQKQAINQRFW-UGSOOPFHSA-N
InChI=1S/C22H23F3N4O4/c1-13(27-17(31)8-9-22(23,24)25)20(32)28-18-15-6-3-2-5-14(15)16-7-4-10-26-19(16)29(11-12-30)21(18)33/h2-7,10,13,18,30H,8-9,11-12H2,1H3,(H,27,31)(H,28,32)/t13-,18-/m0/s1

HIDE SMILES / InChI

Molecular Formula C22H23F3N4O4
Molecular Weight 464.4376
Charge 0
Count
Stereochemistry ABSOLUTE
Additional Stereochemistry No
Defined Stereocenters 2 / 2
E/Z Centers 0
Optical Activity UNSPECIFIED

Description
Curator's Comment: The description was created based on several sources, including https://clinicaltrials.gov/ct2/show/NCT02784795 | https://clinicaltrials.gov/ct2/show/record/NCT02836600 | https://clinicaltrials.gov/ct2/show/NCT02518113 | http://meetinglibrary.asco.org/record/109393/abstract

LY-3039478 is an orally bioavailable, novel small molecule inhibitor of Notch signaling pathway, developed Eli Lilly and Company for cancer treatment. The Notch receptor, on the surfaces of progenitor cells and cancer cells, binds neighboring cell-surface ligands DLL or JAGGED. On ligand binding, the intramembrane protease γ-secretase cleaves the Notch intracellular domain (NICD). LY-3039478 is an exquisitely potent inhibitor of Notch-1 intracellular domain (N1ICD) cleavage with an IC50 of ∼1nM in most of the tumor cell lines tested. LY3039478 also potently inhibits mutant Notch receptor activity. Treatment with a gamma-secretase inhibitor, LY3039478, significantly inhibited the growth of 2 CCRCC(Clear cell renal cell carcinoma) cell lines in a concentration-dependent manner. LY3039478 treatment also led to decreased expression of Myc and Cyclin A1, two genes that were part of the NOTCH driven proliferative signature in murine and human model systems. LY3039478 treatment also led to G0/G1 cell cycle arrest in CCRCC cells. In a xenograft tumor model, LY3039478 inhibited N1ICD cleavage and expression of Notch-regulated genes in the tumor microenvironment. The inhibition of Notch cleavage also resulted in the induction of apoptosis in a Notch-dependent xenograft model. In immunodeficient NSG mice xenografted with 769-P CCRCC cells, LY3039478 treatment resulted in significantly increased survival and delayed tumor growth in independent cohorts of mice demonstrating in vivo efficacy in CCRCC. LY3039478 is being investigated in a clinical trial in patients with T-cell acute lymphoblastic leukemia or T-cell lymphoblastic lymphoma in combination with Dexamethasone.

Approval Year

Targets

Targets

Primary TargetPharmacologyConditionPotency
0.23 nM [IC50]
Conditions

Conditions

ConditionModalityTargetsHighest PhaseProduct
Primary
Unknown

Approved Use

Unknown
Primary
Unknown

Approved Use

Unknown
Primary
Unknown

Approved Use

Unknown
Primary
Unknown

Approved Use

Unknown
Primary
Unknown

Approved Use

Unknown
Cmax

Cmax

ValueDoseCo-administeredAnalytePopulation
175 ng/mL
20 mg 3 times / week multiple, oral
dose: 20 mg
route of administration: Oral
experiment type: MULTIPLE
co-administered:
LY-3039478 plasma
Homo sapiens
population: UNHEALTHY
age: ADULT
sex: FEMALE / MALE
food status: UNKNOWN
522 ng/mL
45 mg 3 times / week multiple, oral
dose: 45 mg
route of administration: Oral
experiment type: MULTIPLE
co-administered:
LY-3039478 plasma
Homo sapiens
population: UNHEALTHY
age: ADULT
sex: FEMALE / MALE
food status: UNKNOWN
444 ng/mL
75 mg 3 times / week multiple, oral
dose: 75 mg
route of administration: Oral
experiment type: MULTIPLE
co-administered:
LY-3039478 plasma
Homo sapiens
population: UNHEALTHY
age: ADULT
sex: FEMALE / MALE
food status: UNKNOWN
770 ng/mL
100 mg 3 times / week multiple, oral
dose: 100 mg
route of administration: Oral
experiment type: MULTIPLE
co-administered:
LY-3039478 plasma
Homo sapiens
population: UNHEALTHY
age: ADULT
sex: FEMALE / MALE
food status: UNKNOWN
296 ng/mL
50 mg single, oral
dose: 50 mg
route of administration: Oral
experiment type: SINGLE
co-administered:
LY-3039478 plasma
Homo sapiens
population: HEALTHY
age: ADULT
sex: FEMALE / MALE
food status: FASTED
461 ng/mL
75 mg single, oral
dose: 75 mg
route of administration: Oral
experiment type: SINGLE
co-administered:
LY-3039478 plasma
Homo sapiens
population: HEALTHY
age: ADULT
sex: FEMALE / MALE
food status: FASTED
158 ng/mL
25 mg single, oral
dose: 25 mg
route of administration: Oral
experiment type: SINGLE
co-administered:
LY-3039478 plasma
Homo sapiens
population: HEALTHY
age: ADULT
sex: FEMALE / MALE
food status: FASTED
AUC

AUC

ValueDoseCo-administeredAnalytePopulation
1170 ng × h/mL
20 mg 3 times / week multiple, oral
dose: 20 mg
route of administration: Oral
experiment type: MULTIPLE
co-administered:
LY-3039478 plasma
Homo sapiens
population: UNHEALTHY
age: ADULT
sex: FEMALE / MALE
food status: UNKNOWN
3220 ng × h/mL
45 mg 3 times / week multiple, oral
dose: 45 mg
route of administration: Oral
experiment type: MULTIPLE
co-administered:
LY-3039478 plasma
Homo sapiens
population: UNHEALTHY
age: ADULT
sex: FEMALE / MALE
food status: UNKNOWN
3350 ng × h/mL
75 mg 3 times / week multiple, oral
dose: 75 mg
route of administration: Oral
experiment type: MULTIPLE
co-administered:
LY-3039478 plasma
Homo sapiens
population: UNHEALTHY
age: ADULT
sex: FEMALE / MALE
food status: UNKNOWN
3900 ng × h/mL
100 mg 3 times / week multiple, oral
dose: 100 mg
route of administration: Oral
experiment type: MULTIPLE
co-administered:
LY-3039478 plasma
Homo sapiens
population: UNHEALTHY
age: ADULT
sex: FEMALE / MALE
food status: UNKNOWN
1400 ng × h/mL
50 mg single, oral
dose: 50 mg
route of administration: Oral
experiment type: SINGLE
co-administered:
LY-3039478 plasma
Homo sapiens
population: HEALTHY
age: ADULT
sex: FEMALE / MALE
food status: FASTED
2090 ng × h/mL
75 mg single, oral
dose: 75 mg
route of administration: Oral
experiment type: SINGLE
co-administered:
LY-3039478 plasma
Homo sapiens
population: HEALTHY
age: ADULT
sex: FEMALE / MALE
food status: FASTED
711 ng × h/mL
25 mg single, oral
dose: 25 mg
route of administration: Oral
experiment type: SINGLE
co-administered:
LY-3039478 plasma
Homo sapiens
population: HEALTHY
age: ADULT
sex: FEMALE / MALE
food status: FASTED
T1/2

T1/2

ValueDoseCo-administeredAnalytePopulation
5.76 h
20 mg 3 times / week multiple, oral
dose: 20 mg
route of administration: Oral
experiment type: MULTIPLE
co-administered:
LY-3039478 plasma
Homo sapiens
population: UNHEALTHY
age: ADULT
sex: FEMALE / MALE
food status: UNKNOWN
5.74 h
45 mg 3 times / week multiple, oral
dose: 45 mg
route of administration: Oral
experiment type: MULTIPLE
co-administered:
LY-3039478 plasma
Homo sapiens
population: UNHEALTHY
age: ADULT
sex: FEMALE / MALE
food status: UNKNOWN
5.19 h
75 mg 3 times / week multiple, oral
dose: 75 mg
route of administration: Oral
experiment type: MULTIPLE
co-administered:
LY-3039478 plasma
Homo sapiens
population: UNHEALTHY
age: ADULT
sex: FEMALE / MALE
food status: UNKNOWN
5.39 h
100 mg 3 times / week multiple, oral
dose: 100 mg
route of administration: Oral
experiment type: MULTIPLE
co-administered:
LY-3039478 plasma
Homo sapiens
population: UNHEALTHY
age: ADULT
sex: FEMALE / MALE
food status: UNKNOWN
5.47 h
50 mg single, oral
dose: 50 mg
route of administration: Oral
experiment type: SINGLE
co-administered:
LY-3039478 plasma
Homo sapiens
population: HEALTHY
age: ADULT
sex: FEMALE / MALE
food status: FASTED
5.71 h
75 mg single, oral
dose: 75 mg
route of administration: Oral
experiment type: SINGLE
co-administered:
LY-3039478 plasma
Homo sapiens
population: HEALTHY
age: ADULT
sex: FEMALE / MALE
food status: FASTED
5.63 h
25 mg single, oral
dose: 25 mg
route of administration: Oral
experiment type: SINGLE
co-administered:
LY-3039478 plasma
Homo sapiens
population: HEALTHY
age: ADULT
sex: FEMALE / MALE
food status: FASTED
Sourcing

Sourcing

Vendor/AggregatorIDURL
PubMed

PubMed

TitleDatePubMed
Notch Pathway Is Activated via Genetic and Epigenetic Alterations and Is a Therapeutic Target in Clear Cell Renal Cancer.
2017 Jan 20
Patents

Sample Use Guides

Maximum tolerable dose 75 mg (3 times per week)
Route of Administration: Oral
MIAPaCa2, CCRF-CEM, HCT 116, A2780 and MOLT-4 cell lines were used for activity evaluation. LY-3039478 shows potent Inhibition of gamma-secretase mediated cleavage of Notch 1 assessed as nuclear accumulation of Notch 1 intracellular domain (N1ICD) after 24 hrs by ELISA
Substance Class Chemical
Created
by admin
on Sat Dec 16 09:03:58 GMT 2023
Edited
by admin
on Sat Dec 16 09:03:58 GMT 2023
Record UNII
923X28214S
Record Status Validated (UNII)
Record Version
  • Download
Name Type Language
CRENIGACESTAT
INN   USAN  
Official Name English
JSMD194
Code English
LY-3039478
Code English
Crenigacestat [WHO-DD]
Common Name English
LY3039478
Code English
JSMD-194
Code English
4,4,4-TRIFLUORO-N-((2S)-1-(((7S)-5-(2-HYDROXYETHYL)-6-OXO-6,7-DIHYDRO-5H-PYRIDO(3,2-A)(3)BENZOXAZEPIN-7-YL)AMINO)-1-OXOPROPAN-2-YL)BUTANAMIDE
Systematic Name English
N-[(2S)-1-{[(7S)-5-(2-Hydroxyethyl)-6-oxo-6,7-dihydro-5H-pyrido[3,2-a][3]benzazepin-7-yl]amino}-1-oxopropan-2-yl]-4,4,4-trifluorobutanamide
Systematic Name English
crenigacestat [INN]
Common Name English
CRENIGACESTAT [USAN]
Common Name English
BUTANAMIDE, N-((1S)-2-(((7S)-6,7-DIHYDRO-5-(2-HYDROXYETHYL)-6-OXO-5H-PYRIDO(3,2-A)(3)BENZAZEPIN-7-YL)AMINO)-1-METHYL-2-OXOETHYL)-4,4,4-TRIFLUORO-
Systematic Name English
4,4,4-TRIFLUORO-N- ((1S)-2-(((7S)-5-(2-HYDROXYETHYL)-6-OXO-7H-PYRIDO(2,3-D)(3)BENZAZEPIN-7-YL)AMINO)-1-METHYL-2-OXO-ETHYL)BUTANAMIDE
Systematic Name English
Code System Code Type Description
SMS_ID
100000177956
Created by admin on Sat Dec 16 09:03:58 GMT 2023 , Edited by admin on Sat Dec 16 09:03:58 GMT 2023
PRIMARY
FDA UNII
923X28214S
Created by admin on Sat Dec 16 09:03:58 GMT 2023 , Edited by admin on Sat Dec 16 09:03:58 GMT 2023
PRIMARY
CAS
1421438-81-4
Created by admin on Sat Dec 16 09:03:58 GMT 2023 , Edited by admin on Sat Dec 16 09:03:58 GMT 2023
PRIMARY
USAN
DE-164
Created by admin on Sat Dec 16 09:03:58 GMT 2023 , Edited by admin on Sat Dec 16 09:03:58 GMT 2023
PRIMARY
DRUG BANK
DB12050
Created by admin on Sat Dec 16 09:03:58 GMT 2023 , Edited by admin on Sat Dec 16 09:03:58 GMT 2023
PRIMARY
PUBCHEM
71236992
Created by admin on Sat Dec 16 09:03:58 GMT 2023 , Edited by admin on Sat Dec 16 09:03:58 GMT 2023
PRIMARY
NCI_THESAURUS
C171871
Created by admin on Sat Dec 16 09:03:58 GMT 2023 , Edited by admin on Sat Dec 16 09:03:58 GMT 2023
PRIMARY
INN
10655
Created by admin on Sat Dec 16 09:03:58 GMT 2023 , Edited by admin on Sat Dec 16 09:03:58 GMT 2023
PRIMARY
Related Record Type Details
SALT/SOLVATE -> PARENT
TARGET -> INHIBITOR
SOLVATE->ANHYDROUS
Related Record Type Details
ACTIVE MOIETY