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Details

Stereochemistry ACHIRAL
Molecular Formula C20H17F3N4O3
Molecular Weight 418.3692
Optical Activity NONE
Defined Stereocenters 0 / 0
E/Z Centers 0
Charge 0

SHOW SMILES / InChI
Structure of GNF-5

SMILES

OCCNC(=O)C1=CC=CC(=C1)C2=NC=NC(NC3=CC=C(OC(F)(F)F)C=C3)=C2

InChI

InChIKey=IIQUYGWWHIHOCF-UHFFFAOYSA-N
InChI=1S/C20H17F3N4O3/c21-20(22,23)30-16-6-4-15(5-7-16)27-18-11-17(25-12-26-18)13-2-1-3-14(10-13)19(29)24-8-9-28/h1-7,10-12,28H,8-9H2,(H,24,29)(H,25,26,27)

HIDE SMILES / InChI

Molecular Formula C20H17F3N4O3
Molecular Weight 418.3692
Charge 0
Count
Stereochemistry ACHIRAL
Additional Stereochemistry No
Defined Stereocenters 0 / 0
E/Z Centers 0
Optical Activity NONE

Description
Curator's Comment: Description was created based on several sources, including https://www.ncbi.nlm.nih.gov/pubmed/20072125 | https://www.ncbi.nlm.nih.gov/pubmed/25683919

Chronic myelogenous leukemia (CML) is a hematological malignancy caused by a chromosomal rearrangement that generates a fusion protein, Bcr-Abl, with deregulated tyrosine kinase activity. GNF-5, an analogue of GNF-2 with improved pharmacokinetic properties, is an allosteric inhibitor of Bcr-Abl that enters the myristate binding pocket at the base of the C-lobe in the Abl kinase domain. When used in combination with the ATP-competitive inhibitors imatinib or nilotinib, suppressed the emergence of resistance mutations in vitro, displayed additive inhibitory activity in biochemical and cellular assays against T315I mutant human Bcr-Abl and displayed in vivo efficacy against this recalcitrant mutant in a murine bone-marrow transplantation model. Findings in streptozotocin treated mice (diabetes model) demonstrated that GNF-5 prevented the loss of beta cells and the increase in blood glucose as well as increased insulin protein levels when compared with control mice. In addition GNF-5 inhibited the development of airway hyperresponsiveness and airway remodeling in mouse model of asthma.

Originator

Curator's Comment: # Dana Farber Cancer Institute, Harvard Medical School / Novartis Institutes for BioMedical Research

Approval Year

Targets

Targets

Primary TargetPharmacologyConditionPotency
0.22 µM [IC50]
Conditions

Conditions

ConditionModalityTargetsHighest PhaseProduct
Primary
Unknown

Approved Use

Unknown
Primary
Unknown

Approved Use

Unknown
Primary
Unknown

Approved Use

Unknown
PubMed

PubMed

TitleDatePubMed
Non-receptor tyrosine kinase inhibitors enhances β-cell survival by suppressing the PKCδ signal transduction pathway in streptozotocin-induced β-cell apoptosis.
2015-06
c-Abl tyrosine kinase regulates cytokinesis of human airway smooth muscle cells.
2014-06
Role of Abl in airway hyperresponsiveness and airway remodeling.
2013-10-11
The ins and outs of bcr-abl inhibition.
2012-05
Allosteric interactions between the myristate- and ATP-site of the Abl kinase.
2011-01-10
Chemical kinomics: a powerful strategy for target deconvolution.
2010-11
Expanding the diversity of allosteric bcr-abl inhibitors.
2010-10-14
Targeting Bcr-Abl by combining allosteric with ATP-binding-site inhibitors.
2010-01-28
Patents

Sample Use Guides

mice (asthma model) were intranasally instilled with 10 mg/kg GNF-5. oral GNF-5 (75 mg/kg b.i.d.) in combination with nilotinib demonstrates efficacy in bone marrow transduction/transplantation (BMT) mouse model that more closely resembles human chronic myelogenous leukemia
Route of Administration: Other
GNF-5 shows potent antiproliferative activity with EC50 of 430 nM and 580 nM against wt-Bcr-Abl and E255K mutant Bcr-Abl transformed cells, respectively.
Substance Class Chemical
Created
by admin
on Mon Mar 31 22:08:22 GMT 2025
Edited
by admin
on Mon Mar 31 22:08:22 GMT 2025
Record UNII
3ZUA56XMQQ
Record Status Validated (UNII)
Record Version
  • Download
Name Type Language
BENZAMIDE, N-(2-HYDROXYETHYL)-3-(6-((4-(TRIFLUOROMETHOXY)PHENYL)AMINO)-4-PYRIMIDINYL)-
Preferred Name English
GNF-5
Common Name English
Code System Code Type Description
PUBCHEM
44129660
Created by admin on Mon Mar 31 22:08:22 GMT 2025 , Edited by admin on Mon Mar 31 22:08:22 GMT 2025
PRIMARY
FDA UNII
3ZUA56XMQQ
Created by admin on Mon Mar 31 22:08:22 GMT 2025 , Edited by admin on Mon Mar 31 22:08:22 GMT 2025
PRIMARY
CAS
778277-15-9
Created by admin on Mon Mar 31 22:08:22 GMT 2025 , Edited by admin on Mon Mar 31 22:08:22 GMT 2025
PRIMARY
Related Record Type Details
ACTIVE MOIETY