U.S. Department of Health & Human Services Divider Arrow National Institutes of Health Divider Arrow NCATS

Details

Stereochemistry ABSOLUTE
Molecular Formula C17H22N2O3
Molecular Weight 302.3682
Optical Activity UNSPECIFIED
Defined Stereocenters 1 / 1
E/Z Centers 2
Charge 0

SHOW SMILES / InChI
Structure of TRICHOSTATIN A

SMILES

C[C@H](\C=C(C)\C=C\C(=O)NO)C(=O)C1=CC=C(C=C1)N(C)C

InChI

InChIKey=RTKIYFITIVXBLE-QEQCGCAPSA-N
InChI=1S/C17H22N2O3/c1-12(5-10-16(20)18-22)11-13(2)17(21)14-6-8-15(9-7-14)19(3)4/h5-11,13,22H,1-4H3,(H,18,20)/b10-5+,12-11+/t13-/m1/s1

HIDE SMILES / InChI

Molecular Formula C17H22N2O3
Molecular Weight 302.3682
Charge 0
Count
Stereochemistry ABSOLUTE
Additional Stereochemistry No
Defined Stereocenters 1 / 1
E/Z Centers 2
Optical Activity UNSPECIFIED

Description
Curator's Comment: Description was created based on several sources, including https://www.ncbi.nlm.nih.gov/pubmed/15180568

Trichostatin A (TSA) was originally isolated as an antifungal antibiotic along with its fermentation congeners trichostatin B ((TSA)3-Fe) and the D-glucopyranosides trichostatin C and D. TSA inhibits HDAC in the low nanomolar range and is an inducer of histone hyperacetylation, both in vitro and in vivo. It inhibits all class I and II deacetylases to a similar extent in both tumor and non-tumor cells, although HDAC4 is slightly resistant when compared with HDAC1 and HDAC6. Class III HDAC is not affected by TSA. It has been shown that TSA dosedependently inhibits growth and induces apoptosis in a plethora of carcinoma cell lines in vitro. Recently, it was also found that TSA inhibits angiogenesis, which is important for the growth and metastasis of solid tumors, both in vivo and in vitro. In HT-29 colon carcinoma cells, a single dose of TSA induced transient hyperacetylation of histone H4 resulting in the induction of p21WAF1/Cip1 and inhibition of cellular proliferation at both the G1 and G2 phases of the cell cycle. Growth inhibition was associated with decreased cyclin D1 mRNA and cdk6 protein levels and increased cyclin D3 protein and p21WAF1/Cip1 mRNA levels. Cyclin D1 protein, cyclin D3 mRNA, cdk2 and cdk4 remained unaffected. In addition, TSA induced apoptosis by upregulating the expression of the pro-apoptotic genes ID1, ID2 and ID3, whereas the expression of the anti-apoptotic genes BclxL and Hsp27 was decreased In vivo, TSA induces differentiation and shows chemotherapeutic activity against N-methylnitrosureainduced rat mammary cancer without toxic side effects. TSA may also have therapeutic potential for the treatment of a variety of genetic and infectious diseases since silenced, transduced genes are reactivated probably due to structural changes of the chromatin on integrated viral sequences.

CNS Activity

Curator's Comment: TSA has been shown to pass the blood-brain barrier in different mouse models

Originator

Curator's Comment: In 1970s, Tsuji et al. initially isolated trichostatin A (TSA) and its glucopyranosyl derivative (trichostatin C) from Streptomyces hygroscopicus, as antifungal antibiotics active against Trichophyfon

Approval Year

PubMed

PubMed

TitleDatePubMed
Trichostatin A and 5 Aza-2' deoxycytidine decrease estrogen receptor mRNA stability in ER positive MCF7 cells through modulation of HuR.
2008-09
ER alpha negative breast cancer cells restore response to endocrine therapy by combination treatment with both HDAC inhibitor and DNMT inhibitor.
2008-08
p21(WAF1/CIP1) induction by 5-azacytosine nucleosides requires DNA damage.
2008-06-05
Epigenetic-based treatments emphasize the biologic differences of core-binding factor acute myeloid leukemias.
2008-06
Epigenetic silencing of maspin expression occurs early in the conversion of keratocytes to fibroblasts.
2008-04
Differential epigenetic regulation of Aiolos expression in human tumoral cell lines and primary cells.
2008-02-06
DNA demethylation and histone deacetylation inhibition co-operate to re-express estrogen receptor beta and induce apoptosis in prostate cancer cell-lines.
2008-02-01
Histone deacetylase inhibitors and hydroxyurea modulate the cell cycle and cooperatively induce apoptosis.
2008-01-31
Genome-wide transcriptional response to 5-aza-2'-deoxycytidine and trichostatin a in multiple myeloma cells.
2008-01-01
Re-expression of methylation-induced tumor suppressor gene silencing is associated with the state of histone modification in gastric cancer cell lines.
2007-12-14
Epigenetic regulation of leptin affects MMP-13 expression in osteoarthritic chondrocytes: possible molecular target for osteoarthritis therapeutic intervention.
2007-12
Epigenetic regulation of RhoB loss of expression in lung cancer.
2007-11-30
Genetic and epigenetic changes in the common 1p36 deletion in neuroblastoma tumours.
2007-11-19
Homocysteine inhibits endothelial cell growth via DNA hypomethylation of the cyclin A gene.
2007-11-15
Histone deacetylase 5 epigenetically controls behavioral adaptations to chronic emotional stimuli.
2007-11-08
Extended treatment with physiologic concentrations of dietary phytochemicals results in altered gene expression, reduced growth, and apoptosis of cancer cells.
2007-11
Regulation of the CLDN3 gene in ovarian cancer cells.
2007-11
ZIC1 gene expression is controlled by DNA and histone methylation in mesenchymal proliferations.
2007-10-30
Trichostatin A, sodium butyrate, and 5-aza-2'-deoxycytidine alter the expression of glucocorticoid receptor alpha and beta isoforms in Hut-78 T- and Raji B-lymphoma cell lines.
2007-08
COX-2 expression induced by diesel particles involves chromatin modification and degradation of HDAC1.
2007-08
[The role of secreted Wnt-antagonist genes hypermethylation in early detection of colorectal tumor].
2007-07-24
Effects of chromatin-modifying agents on CD34+ cells from patients with idiopathic myelofibrosis.
2007-07-01
Evidence of endogenous mu opioid receptor regulation by epigenetic control of the promoters.
2007-07
The comparative effects of gene modulators on thyroid-specific genes and radioiodine uptake.
2007-06
Transcriptional silencing of the TMS1/ASC tumour suppressor gene by an epigenetic mechanism in hepatocellular carcinoma cells.
2007-06
Diverse histone modifications on histone 3 lysine 9 and their relation to DNA methylation in specifying gene silencing.
2007-05-24
Trichostatin A and 5-aza-2'-deoxycytidine switch S1P from an inhibitor to a stimulator of motility through epigenetic regulation of S1P receptors.
2007-05-18
Up-regulation of ras-GAP genes is reversed by a MEK inhibitor and doxorubicin in v-Ki-ras-transformed NIH/3T3 fibroblasts.
2007-05-04
Tissue factor pathway inhibitor-2 as a frequently silenced tumor suppressor gene in hepatocellular carcinoma.
2007-05
Histone deacetylase inhibitor trichostatin a potentiates doxorubicin-induced apoptosis by up-regulating PTEN expression.
2007-04-15
Boric acid inhibits embryonic histone deacetylases: a suggested mechanism to explain boric acid-related teratogenicity.
2007-04-15
The use of histone deacetylase inhibitor FK228 and DNA hypomethylation agent 5-azacytidine in human bladder cancer therapy.
2007-04-15
Chromatin-modifying agents permit human hematopoietic stem cells to undergo multiple cell divisions while retaining their repopulating potential.
2007-04-15
Combined effects of retinoic acid and histone deacetylase inhibitors on human neuroblastoma SH-SY5Y cells.
2007-04
Histone deacetylase inhibition and progesterone act synergistically to stimulate baboon glycodelin gene expression.
2007-03
Regulation of Cdx2 expression by promoter methylation, and effects of Cdx2 transfection on morphology and gene expression of human esophageal epithelial cells.
2007-02
Plasticity of Ly49g expression is due to epigenetics.
2007-02
Epigenetic modulation of endogenous tumor suppressor expression in lung cancer xenografts suppresses tumorigenicity.
2007-01-01
[Expression of ER alpha in chemically induced MDA-MB-435 cells and its responsiveness to endocrine].
2006-12
Histone deacetylase inhibitor enhances 5-fluorouracil cytotoxicity by down-regulating thymidylate synthase in human cancer cells.
2006-12
Inhibitors of DNA methylation and histone deacetylation independently relieve AML1/ETO-mediated lysozyme repression.
2006-12
Identification of novel genes associated with astrocytoma progression using suppression subtractive hybridization and real-time reverse transcription-polymerase chain reaction.
2006-11-15
Characterization of cellular retinoid-binding proteins in human myometrium during pregnancy.
2006-11
Histone deacetylase inhibitor trichostatin A and proteasome inhibitor PS-341 synergistically induce apoptosis in pancreatic cancer cells.
2006-10-06
Enhancement of sodium/iodide symporter expression in thyroid and breast cancer.
2006-09
Histone deacetylase inhibitor, trichostatin A, increases the chemosensitivity of anticancer drugs in gastric cancer cell lines.
2006-09
HEX expression and localization in normal mammary gland and breast carcinoma.
2006-07-19
Synergistic induction of folate receptor beta by all-trans retinoic acid and histone deacetylase inhibitors in acute myelogenous leukemia cells: mechanism and utility in enhancing selective growth inhibition by antifolates.
2006-06-01
Angiostatic activity of DNA methyltransferase inhibitors.
2006-02
Retinoic acids and trichostatin A (TSA), a histone deacetylase inhibitor, induce human pyruvate dehydrogenase kinase 4 (PDK4) gene expression.
2005-09-27
Patents

Sample Use Guides

Rats: 0.5 mg/kg in 50 ml DMSO, by s.c. injection twice weekly for 4 weeks
Route of Administration: Other
Trichostatin A inhibits the proliferation of eight breast carcinoma cell lines including MCF-7, T-47D, ZR-75-1, BT-474, MDA-MB-231, MDA-MB-453, CAL 51, and SK-BR-3 with mean IC50 of 124.4 nM (range, 26.4-308.1 nM), with more potency against cell lines that express ERα than the ERα-negative cell lines. Trichostatin A inhibits HDAC activity similarly in all the breast cancer cell lines with mean IC50 of 2.4 nM (range, 0.6-2.6 nM), and results in pronounced histone H4 hyperacetylation.
Substance Class Chemical
Created
by admin
on Mon Mar 31 19:54:07 GMT 2025
Edited
by admin
on Mon Mar 31 19:54:07 GMT 2025
Record UNII
3X2S926L3Z
Record Status Validated (UNII)
Record Version
  • Download
Name Type Language
VTR-297
Preferred Name English
TRICHOSTATIN A
MI  
Common Name English
(R)-TRICHOSTATIN A
Common Name English
NSC-311042
Code English
TRICHOSTATIN A [MI]
Common Name English
2,4-HEPTADIENAMIDE, 7-(4-(DIMETHYLAMINO)PHENYL)-N-HYDROXY-4,6-DIMETHYL-7-OXO-,(2E,4E,6R)-
Common Name English
VTR297
Code English
Classification Tree Code System Code
NCI_THESAURUS C1946
Created by admin on Mon Mar 31 19:54:07 GMT 2025 , Edited by admin on Mon Mar 31 19:54:07 GMT 2025
NCI_THESAURUS C514
Created by admin on Mon Mar 31 19:54:07 GMT 2025 , Edited by admin on Mon Mar 31 19:54:07 GMT 2025
Code System Code Type Description
SMS_ID
300000040589
Created by admin on Mon Mar 31 19:54:07 GMT 2025 , Edited by admin on Mon Mar 31 19:54:07 GMT 2025
PRIMARY
FDA UNII
3X2S926L3Z
Created by admin on Mon Mar 31 19:54:07 GMT 2025 , Edited by admin on Mon Mar 31 19:54:07 GMT 2025
PRIMARY
CAS
58880-19-6
Created by admin on Mon Mar 31 19:54:07 GMT 2025 , Edited by admin on Mon Mar 31 19:54:07 GMT 2025
PRIMARY
NSC
311042
Created by admin on Mon Mar 31 19:54:07 GMT 2025 , Edited by admin on Mon Mar 31 19:54:07 GMT 2025
PRIMARY
DRUG BANK
DB04297
Created by admin on Mon Mar 31 19:54:07 GMT 2025 , Edited by admin on Mon Mar 31 19:54:07 GMT 2025
PRIMARY
MERCK INDEX
m11084
Created by admin on Mon Mar 31 19:54:07 GMT 2025 , Edited by admin on Mon Mar 31 19:54:07 GMT 2025
PRIMARY Merck Index
PUBCHEM
444732
Created by admin on Mon Mar 31 19:54:07 GMT 2025 , Edited by admin on Mon Mar 31 19:54:07 GMT 2025
PRIMARY
NCI_THESAURUS
C1261
Created by admin on Mon Mar 31 19:54:07 GMT 2025 , Edited by admin on Mon Mar 31 19:54:07 GMT 2025
PRIMARY
CHEBI
46024
Created by admin on Mon Mar 31 19:54:07 GMT 2025 , Edited by admin on Mon Mar 31 19:54:07 GMT 2025
PRIMARY
WIKIPEDIA
TRICHOSTATIN A
Created by admin on Mon Mar 31 19:54:07 GMT 2025 , Edited by admin on Mon Mar 31 19:54:07 GMT 2025
PRIMARY
MESH
C012589
Created by admin on Mon Mar 31 19:54:07 GMT 2025 , Edited by admin on Mon Mar 31 19:54:07 GMT 2025
PRIMARY
EPA CompTox
DTXSID6037063
Created by admin on Mon Mar 31 19:54:07 GMT 2025 , Edited by admin on Mon Mar 31 19:54:07 GMT 2025
PRIMARY