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Details

Stereochemistry ACHIRAL
Molecular Formula C17H19N2O.Cl
Molecular Weight 302.799
Optical Activity NONE
Defined Stereocenters 0 / 0
E/Z Centers 0
Charge 0

SHOW SMILES / InChI
Structure of PYRONINE Y

SMILES

[Cl-].CN(C)C1=CC2=C(C=C1)C=C3C=CC(C=C3O2)=[N+](C)C

InChI

InChIKey=INCIMLINXXICKS-UHFFFAOYSA-M
InChI=1S/C17H19N2O.ClH/c1-18(2)14-7-5-12-9-13-6-8-15(19(3)4)11-17(13)20-16(12)10-14;/h5-11H,1-4H3;1H/q+1;/p-1

HIDE SMILES / InChI
Pyronin Y is an intercalating dye with a specificity towards RNA. It has been shown to accumulate in the mitochondria of viable cells. Pyronin Y has been used to measure RNA in flow cytometry. Pyronin Y possesses some anti-cancer properties: it causes cell cycle arrest and increases lifespan in a mouse model of sarcoma.

Approval Year

Targets

Targets

Primary TargetPharmacologyConditionPotency
Target ID: CHEMBL2311222
Conditions

Conditions

ConditionModalityTargetsHighest PhaseProduct
Primary
Unknown

Approved Use

Unknown
PubMed

PubMed

TitleDatePubMed
Flow cytometry analysis of murine hematopoietic stem cells.
2013-01
Cytostatic and cytotoxic properties of pyronin Y: relation to mitochondrial localization of the dye and its interaction with RNA.
1986-11
Patents

Sample Use Guides

Female C57BL/6 x DBA/2 F1 mice were inoculated with Sarcoma 180 ascites tumor and Pyronin Y (PY) was injected i.p. for 6 days. The dose 15 mg/mouse caused 50% increase in life span.
Route of Administration: Intraperitoneal
In Vitro Use Guide
The long-term survival (clonogenicity) studies were carried out on CHO cells. Exponentially growing CHO cells were seeded at a concentration of 100 and 1000 cells in Petri dishes. 4h were allowed for cell reattachment before Pyronin Y (PY) was added directly to these cultures to give various concentrations. After incubation for 4 h, the cells were washed 2 times with Hanks' balanced salt solution and refed with a fresh prewarmed medium. Stationary CHO cultures were prepared by growing cells to confluence followed by the addition of fresh medium. After a further 2 days, these cultures were treated with various concentrations of PY for 4 h, trypsinized, washed free of PY, and replated at a concentration of 100 or 1000 cells per plate in drug-free medium. The 4-h exposure of exponentially growing CHO cells to 16.7 UMPY reduced clonogenicity by 50% and exposure to 26.7 uM decreased clonogenicity by 99.9%.
Name Type Language
C.I. 45005
Preferred Name English
PYRONINE Y
MI  
Common Name English
CI-45005
Code English
PYRONINE Y [MI]
Common Name English
PYRONINE
Common Name English
PYRONINE G
Common Name English
3,6-BIS(DIMETHYLAMINO)XANTHYLIUM CHLORIDE (1:1)
Systematic Name English
TETRAMETHYLDIAMINOXANTHYLIUM CHLORIDE
Systematic Name English
NSC-10454
Code English
PYRONIN Y
Common Name English
Code System Code Type Description
PUBCHEM
7085
Created by admin on Mon Mar 31 18:56:13 GMT 2025 , Edited by admin on Mon Mar 31 18:56:13 GMT 2025
PRIMARY
EPA CompTox
DTXSID8059051
Created by admin on Mon Mar 31 18:56:13 GMT 2025 , Edited by admin on Mon Mar 31 18:56:13 GMT 2025
PRIMARY
FDA UNII
W659G165T1
Created by admin on Mon Mar 31 18:56:13 GMT 2025 , Edited by admin on Mon Mar 31 18:56:13 GMT 2025
PRIMARY
ECHA (EC/EINECS)
202-147-8
Created by admin on Mon Mar 31 18:56:13 GMT 2025 , Edited by admin on Mon Mar 31 18:56:13 GMT 2025
PRIMARY
MERCK INDEX
m9389
Created by admin on Mon Mar 31 18:56:13 GMT 2025 , Edited by admin on Mon Mar 31 18:56:13 GMT 2025
PRIMARY Merck Index
NSC
10454
Created by admin on Mon Mar 31 18:56:13 GMT 2025 , Edited by admin on Mon Mar 31 18:56:13 GMT 2025
PRIMARY
CAS
92-32-0
Created by admin on Mon Mar 31 18:56:13 GMT 2025 , Edited by admin on Mon Mar 31 18:56:13 GMT 2025
PRIMARY
CHEBI
8682
Created by admin on Mon Mar 31 18:56:13 GMT 2025 , Edited by admin on Mon Mar 31 18:56:13 GMT 2025
PRIMARY